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Batch plotting from manifest

Source: R/batch.R
plot_batch.Rd

Batch plotting from manifest

Usage

plot_batch(manifest, out_dir, cfg = list())

Arguments

manifest

Data frame or path to a CSV/YAML manifest. Relative input paths in a file manifest are resolved from the manifest's directory.

out_dir

Output directory.

cfg

Base config list.

Value

A data frame with one ok or error status per job. A failed job does not stop later jobs.

Examples

manifest <- system.file("templates", "manifest_template.csv", package = "MMV")
result <- plot_batch(manifest, file.path(tempdir(), "MMV-batch"))
result[, c("task", "status")]
#>        task status
#> 1 watermaze     ok
#> 2 minefield     ok